Software
In this section you can find software that was developed by members of our institute. If you have any questions or if there are any problems, please contact us.
modelbase: A Python Package for Modeling Biological Systems
modelbase is a python package that faciliates the in silico implementation of complex biological systems. This package includes diverse applications and is still growing. You can use modelbase to develop ordinary differential and simple partial differential equation based models. In addition to this, it is quite easy to construct carbon labeling systems that can be used to understand the distribution of isotopomers in metabolic networks.
For detailed install instructions, please visit the modelbase site on pypi. The source code can be found here.