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QTB Team Details

Foto von Marvin van Aalst

Doktorand

Marvin van Aalst M.Sc.
Quantitative und Theoretische Biologie
Heinrich-Heine-Universität Düsseldorf
Universitätsstraße 1
Gebäude: 22.07
Etage/Raum: 00.028
Düsseldorf
+49 211 81-10171


Aufgabenfelder

Topic of bachelor thesis: Isotope-labelled modeling of the Calvin-Benson-Bassham cycle


Although the Calvin-Benson-Bassham cycle was already proposed in 1954, it is still the subject of intense research. The controversy about the cycle’s structure was fuelled by the findings of Gibbs and Kandler in 1956 and 1957, when they observed that radioactive 14CO2 was dynamically incorporated in hexoses in a very atypical and asymmetrical way, a phenomenon later termed the ‘photosynthetic Gibbs effect’. Now, it is widely accepted that the photosynthetic Gibbs effect is not in contradiction to the reaction scheme proposed by CBB, but the arguments given have been largely qualitative and hand-waving. With this work we present the, to the best of our knowledge, first quantitative examination of the photosynthetic Gibbs effect. Using our model findings, we can show, that some of the asymmetries measured by Gibbs are in fact emergent phenomena of the CBB cycle structure [publication pending].

Publikationsverzeichnis
  • Saadat NP, van Aalst M, Ebenhöh O. Network Reconstruction and Modelling Made Reproducible with moped. Metabolites. 2022; 12(4):275. https://doi.org/10.3390/metabo12040275
  • Ebenhöh, Oliver, Marvin van Aalst, Nima P. Saadat, Tim Nies, und Anna Matuszyńska. ”Building Mathematical Models of Biological Systems with Modelbase”. Journal of Open Research Software 6 (16. November 2018). doi.org/10.5334/jors.236
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